Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenite transporter, acr3 family | SAMN06295900_106212 | Not Available | Negative | 3129889 - 3130953 | 38045.9 |
| amino-acid n-acetyltransferase | SAMN06295900_106213 | Not Available | Negative | 3130999 - 3131445 | 15978.2 |
| transcriptional regulator, arsr family | SAMN06295900_106214 | Not Available | Negative | 3131499 - 3131828 | 11597.1 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN06295900_106215 | Not Available | Negative | 3131914 - 3132771 | 31585.3 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06295900_106216 | Not Available | Negative | 3132771 - 3133244 | 17082.5 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_106217 | Not Available | Negative | 3133519 - 3134859 | 45335.6 |
| adp-heptose:lps heptosyltransferase | SAMN06295900_106218 | Not Available | Positive | 3135196 - 3136293 | 39203.2 |
| hypothetical protein | SAMN06295900_106219 | Not Available | Negative | 3136281 - 3136850 | 20075.7 |
| sulfonate transport system substrate-binding protein | SAMN06295900_106220 | Not Available | Positive | 3137363 - 3138364 | 35145.1 |
| alkanesulfonate monooxygenase | SAMN06295900_106221 | Not Available | Positive | 3138413 - 3139570 | 41899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.