Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN06295900_106202 | Not Available | Positive | 3119989 - 3120900 | 32919.4 |
| putative spermidine/putrescine transport system permease protein | SAMN06295900_106203 | Not Available | Positive | 3120897 - 3121703 | 28799.3 |
| aldehyde dehydrogenase (nad+) | SAMN06295900_106204 | Not Available | Positive | 3121700 - 3123127 | 50969.8 |
| 5-(hydroxymethyl)furfural/furfural oxidase | SAMN06295900_106205 | Not Available | Negative | 3123196 - 3124950 | 62603.2 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN06295900_106206 | Not Available | Negative | 3124977 - 3126011 | 37674.9 |
| nte family protein | SAMN06295900_106207 | Not Available | Negative | 3126229 - 3127500 | 47215.0 |
| hypothetical protein | SAMN06295900_106208 | Not Available | Negative | 3127490 - 3127654 | 5667.95 |
| acetoacetate decarboxylase | SAMN06295900_106209 | Not Available | Negative | 3127671 - 3128450 | 28639.3 |
| arsenical resistance protein arsh | SAMN06295900_106210 | Not Available | Negative | 3128696 - 3129460 | 28391.8 |
| arsenate reductase | SAMN06295900_106211 | Not Available | Negative | 3129457 - 3129879 | 15156.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.