Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-strand binding protein | SAMN06295900_106182 | Not Available | Positive | 3095398 - 3095925 | 18209.2 |
| cu+-exporting atpase | SAMN06295900_106183 | Not Available | Negative | 3096169 - 3098439 | 79470.0 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN06295900_106184 | Not Available | Negative | 3098429 - 3101695 | 117726.0 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN06295900_106185 | Not Available | Negative | 3101692 - 3103230 | 53931.7 |
| outer membrane protein tolc | SAMN06295900_106186 | Not Available | Negative | 3103242 - 3104534 | 46797.8 |
| hypothetical protein | SAMN06295900_106187 | Not Available | Negative | 3104626 - 3105009 | 13405.5 |
| putative copper resistance protein d | SAMN06295900_106188 | Not Available | Negative | 3105193 - 3106134 | 33191.1 |
| hypothetical protein | SAMN06295900_106189 | Not Available | Negative | 3106135 - 3106509 | 12851.6 |
| cu and ag efflux protein cusf | SAMN06295900_106190 | Not Available | Negative | 3106569 - 3106949 | 13220.2 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN06295900_106191 | Not Available | Negative | 3107016 - 3108311 | 47480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.