Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | SAMN06295900_106152 | Not Available | Positive | 3065624 - 3065884 | 9422.19 |
| histidinol-phosphate aminotransferase | SAMN06295900_106153 | Not Available | Negative | 3065929 - 3066999 | 39456.0 |
| peptidyl-trna hydrolase | SAMN06295900_106154 | Not Available | Negative | 3067060 - 3067662 | 22011.5 |
| lsu ribosomal protein l25p | SAMN06295900_106155 | Not Available | Negative | 3067782 - 3068393 | 21872.2 |
| ribose-phosphate pyrophosphokinase | SAMN06295900_106156 | Not Available | Negative | 3068561 - 3069517 | 34289.7 |
| Trna-gln | Not Available | Not Available | Positive | 3069556 - 3069632 | Not Available |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN06295900_106158 | Not Available | Negative | 3069687 - 3070577 | 31756.0 |
| outer membrane lipoprotein lolb | SAMN06295900_106159 | Not Available | Negative | 3070611 - 3071237 | 22635.9 |
| tetratricopeptide repeat-containing protein | SAMN06295900_106160 | Not Available | Negative | 3071237 - 3073066 | 66315.7 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN06295900_106161 | Not Available | Positive | 3073196 - 3074023 | 30610.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.