Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN06295900_106122 | Not Available | Positive | 3033910 - 3034923 | 34602.1 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN06295900_106123 | Not Available | Negative | 3034994 - 3035464 | 17735.1 |
| comf family protein | SAMN06295900_106124 | Not Available | Negative | 3035546 - 3036082 | 19674.8 |
| malonyl-coa o-methyltransferase | SAMN06295900_106125 | Not Available | Positive | 3036452 - 3037408 | 35449.6 |
| uncharacterized membrane protein | SAMN06295900_106126 | Not Available | Positive | 3037738 - 3038214 | 17869.9 |
| cytochrome c oxidase subunit 2 | SAMN06295900_106127 | Not Available | Positive | 3038234 - 3039577 | 47587.0 |
| cytochrome c oxidase subunit 1 | SAMN06295900_106128 | Not Available | Positive | 3039624 - 3041237 | 59768.8 |
| protein of unknown function | SAMN06295900_106129 | Not Available | Positive | 3041435 - 3041647 | 7356.08 |
| cytochrome c oxidase subunit 3 | SAMN06295900_106130 | Not Available | Positive | 3041796 - 3042653 | 32310.4 |
| protein of unknown function | SAMN06295900_106131 | Not Available | Negative | 3042802 - 3043011 | 7977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.