Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co or xanthine dehydrogenase, fad-binding subunit | SAMN06295900_106102 | Not Available | Positive | 3012284 - 3013138 | 30163.5 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN06295900_106103 | Not Available | Positive | 3013119 - 3015950 | 99675.2 |
| bon domain-containing protein | SAMN06295900_106104 | Not Available | Negative | 3016092 - 3016478 | 13161.7 |
| magnesium chelatase family protein | SAMN06295900_106105 | Not Available | Negative | 3016682 - 3018238 | 54537.5 |
| hypothetical protein | SAMN06295900_106106 | Not Available | Positive | 3018655 - 3019794 | 41752.5 |
| nucleotidyltransferase | SAMN06295900_106107 | Not Available | Positive | 3019791 - 3020624 | 31452.6 |
| hypothetical protein | SAMN06295900_106108 | Not Available | Negative | 3020866 - 3021120 | 9823.71 |
| nitrogen regulatory protein p-ii family | SAMN06295900_106109 | Not Available | Positive | 3021499 - 3021837 | 12097.7 |
| ammonium transporter | SAMN06295900_106110 | Not Available | Positive | 3021872 - 3023362 | 50244.5 |
| glutamate--cysteine ligase | SAMN06295900_106111 | Not Available | Positive | 3023633 - 3024922 | 47352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.