Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_10692 | Not Available | Positive | 3002562 - 3003842 | 46631.4 |
| protein of unknown function | SAMN06295900_10693 | Not Available | Positive | 3004052 - 3004591 | 19386.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_10694 | Not Available | Positive | 3004621 - 3005652 | 36974.8 |
| cytochrome p460 | SAMN06295900_10695 | Not Available | Positive | 3005649 - 3006191 | 18942.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_10696 | Not Available | Positive | 3006235 - 3007014 | 27891.3 |
| amidase | SAMN06295900_10697 | Not Available | Positive | 3007042 - 3008475 | 50323.1 |
| two component transcriptional regulator, luxr family | SAMN06295900_10698 | Not Available | Positive | 3008629 - 3009303 | 24290.7 |
| response regulator receiver protein | SAMN06295900_10699 | Not Available | Positive | 3009433 - 3009840 | 14345.6 |
| gaf domain-containing protein | SAMN06295900_106100 | Not Available | Negative | 3009849 - 3011219 | 49669.8 |
| transcriptional regulator, tetr family | SAMN06295900_106101 | Not Available | Positive | 3011552 - 3012229 | 25379.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.