Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_10682 | Not Available | Negative | 2991289 - 2992224 | 34559.1 |
| protein of unknown function | SAMN06295900_10683 | Not Available | Positive | 2992326 - 2992652 | 12285.9 |
| lipoyl(octanoyl) transferase | SAMN06295900_10684 | Not Available | Positive | 2992739 - 2993521 | 27423.8 |
| lipoic acid synthetase | SAMN06295900_10685 | Not Available | Positive | 2993518 - 2994525 | 37144.6 |
| aerobic c4-dicarboxylate transport protein | SAMN06295900_10686 | Not Available | Positive | 2994807 - 2996102 | 45236.8 |
| histidine kinase | SAMN06295900_10687 | Not Available | Positive | 2996099 - 2998084 | 71244.9 |
| two component, sigma54 specific, transcriptional regulator, ntrc subfamily, fis family | SAMN06295900_10688 | Not Available | Positive | 2998140 - 2999537 | 50529.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN06295900_10689 | Not Available | Negative | 2999604 - 3000131 | 19206.2 |
| hypothetical protein | SAMN06295900_10690 | Not Available | Positive | 3000314 - 3000928 | 21902.3 |
| ketopantoate reductase | SAMN06295900_10691 | Not Available | Negative | 3001208 - 3002140 | 32865.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.