Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase (b12-dependent) | SAMN06295900_10662 | Not Available | Negative | 2972738 - 2973835 | 38745.9 |
| protein of unknown function | SAMN06295900_10663 | Not Available | Negative | 2974012 - 2974269 | 9716.57 |
| protein of unknown function | SAMN06295900_10664 | Not Available | Negative | 2974521 - 2975708 | 42065.2 |
| fumarylacetoacetate (faa) hydrolase | SAMN06295900_10665 | Not Available | Positive | 2975957 - 2976949 | 35818.4 |
| enoyl-coa hydratase | SAMN06295900_10666 | Not Available | Positive | 2977091 - 2978002 | 32412.6 |
| hypothetical protein | SAMN06295900_10667 | Not Available | Positive | 2978076 - 2978903 | 27932.6 |
| nte family protein | SAMN06295900_10668 | Not Available | Positive | 2979040 - 2980242 | 42865.2 |
| hypothetical protein | SAMN06295900_10669 | Not Available | Positive | 2980630 - 2981505 | 34459.0 |
| d-beta-d-heptose 1-phosphate adenylyltransferase | SAMN06295900_10670 | Not Available | Positive | 2981557 - 2982042 | 17638.4 |
| hypothetical protein | SAMN06295900_10671 | Not Available | Negative | 2982163 - 2982402 | 8394.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.