Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN06295900_10652 | Not Available | Negative | 2960240 - 2960659 | 15477.6 |
| uncharacterized conserved protein | SAMN06295900_10653 | Not Available | Negative | 2960767 - 2961120 | 12888.5 |
| tetratricopeptide (tpr) repeat | SAMN06295900_10654 | Not Available | Positive | 2961268 - 2962857 | 58491.2 |
| dipeptide transport system substrate-binding protein | SAMN06295900_10655 | Not Available | Negative | 2962943 - 2964538 | 57765.8 |
| short-chain dehydrogenase | SAMN06295900_10656 | Not Available | Negative | 2964852 - 2965619 | 27234.3 |
| thiol:disulfide interchange protein dsba | SAMN06295900_10657 | Not Available | Negative | 2965642 - 2966280 | 23542.4 |
| cell division protein ftsn | SAMN06295900_10658 | Not Available | Negative | 2966428 - 2967285 | 29484.8 |
| arginyl-trna synthetase | SAMN06295900_10659 | Not Available | Negative | 2967346 - 2969124 | 64270.1 |
| protein of unknown function | SAMN06295900_10660 | Not Available | Positive | 2969382 - 2969708 | 11850.3 |
| methionine synthase (b12-dependent) | SAMN06295900_10661 | Not Available | Negative | 2969923 - 2972640 | 99887.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.