Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-c motif-containing protein | SAMN06295900_10642 | Not Available | Negative | 2948989 - 2949459 | 17148.1 |
| hypothetical protein | SAMN06295900_10643 | Not Available | Negative | 2949515 - 2950645 | 40122.8 |
| short-chain dehydrogenase | SAMN06295900_10644 | Not Available | Negative | 2950729 - 2951409 | 23904.5 |
| acetyl-coa c-acetyltransferase | SAMN06295900_10645 | Not Available | Negative | 2951517 - 2952722 | 41147.6 |
| carbonic anhydrase | SAMN06295900_10646 | Not Available | Negative | 2952715 - 2953479 | 27987.5 |
| isocitrate dehydrogenase kinase/phosphatase | SAMN06295900_10647 | Not Available | Negative | 2953576 - 2955414 | 70526.4 |
| transcriptional regulator, merr family | SAMN06295900_10648 | Not Available | Negative | 2955411 - 2955818 | 15439.3 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06295900_10649 | Not Available | Positive | 2956021 - 2957118 | 40411.5 |
| peptidase mpra. serine peptidase. merops family s08a | SAMN06295900_10650 | Not Available | Negative | 2957164 - 2958696 | 52339.2 |
| rna polymerase, sigma subunit, ecf family | SAMN06295900_10651 | Not Available | Negative | 2958950 - 2960230 | 46135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.