Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | SAMN06295900_10632 | Not Available | Positive | 2937957 - 2938898 | 32779.0 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN06295900_10633 | Not Available | Negative | 2939132 - 2939704 | 20190.1 |
| hydroxymethylglutaryl-coa lyase | SAMN06295900_10634 | Not Available | Negative | 2939725 - 2940648 | 32254.6 |
| glyoxylate/hydroxypyruvate reductase a | SAMN06295900_10635 | Not Available | Negative | 2940718 - 2941743 | 37154.7 |
| hypothetical protein | SAMN06295900_10636 | Not Available | Positive | 2941886 - 2942314 | 15997.7 |
| biotin synthase | SAMN06295900_10637 | Not Available | Negative | 2942363 - 2943400 | 37737.0 |
| dethiobiotin synthetase | SAMN06295900_10638 | Not Available | Negative | 2943483 - 2944202 | 24912.3 |
| 8-amino-7-oxononanoate synthase | SAMN06295900_10639 | Not Available | Negative | 2944199 - 2945428 | 42476.6 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme | SAMN06295900_10640 | Not Available | Negative | 2945425 - 2946831 | 50835.5 |
| dienelactone hydrolase | SAMN06295900_10641 | Not Available | Negative | 2947181 - 2948491 | 46530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.