Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin cptb | SAMN06295900_105422 | Not Available | Negative | 2887491 - 2887760 | 10311.2 |
| succinate dehydrogenase subunit b | SAMN06295900_105423 | Not Available | Negative | 2887762 - 2888463 | 26709.2 |
| succinate dehydrogenase subunit a | SAMN06295900_105424 | Not Available | Negative | 2888492 - 2890267 | 64579.9 |
| succinate dehydrogenase subunit d | SAMN06295900_105425 | Not Available | Negative | 2890272 - 2890640 | 13918.2 |
| succinate dehydrogenase subunit c | SAMN06295900_105426 | Not Available | Negative | 2890645 - 2891061 | 15401.2 |
| transcriptional regulator, gntr family | SAMN06295900_105427 | Not Available | Negative | 2891202 - 2891999 | 29387.1 |
| malate dehydrogenase (nad) | SAMN06295900_105428 | Not Available | Positive | 2892337 - 2893320 | 35195.4 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN06295900_105429 | Not Available | Positive | 2893559 - 2894575 | 36772.9 |
| hypothetical protein | SAMN06295900_105430 | Not Available | Positive | 2894572 - 2894781 | 6960.34 |
| addiction module antidote protein, higa family | SAMN06295900_1061 | Not Available | Negative | 2894928 - 2895215 | 10540.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.