Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_105402 | Not Available | Positive | 2865316 - 2866509 | 43851.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN06295900_105403 | Not Available | Positive | 2866506 - 2867621 | 40740.7 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN06295900_105404 | Not Available | Positive | 2867618 - 2868646 | 38177.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN06295900_105405 | Not Available | Positive | 2868937 - 2869623 | 24707.4 |
| uncharacterized conserved protein yect, duf1311 family | SAMN06295900_105406 | Not Available | Positive | 2869684 - 2870061 | 13958.6 |
| linoleoyl-coa desaturase | SAMN06295900_105407 | Not Available | Positive | 2870380 - 2871534 | 42915.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN06295900_105408 | Not Available | Positive | 2871527 - 2872531 | 35024.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_105409 | Not Available | Positive | 2872528 - 2873541 | 36911.2 |
| metallo-beta-lactamase superfamily protein | SAMN06295900_105410 | Not Available | Positive | 2873519 - 2874325 | 29562.3 |
| putative adenylate-forming enzyme | SAMN06295900_105411 | Not Available | Positive | 2874322 - 2875611 | 47724.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.