Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dedd protein | SAMN06295900_105382 | Not Available | Negative | 2843224 - 2844141 | 31607.8 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN06295900_105383 | Not Available | Negative | 2844138 - 2845448 | 46787.0 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | SAMN06295900_105384 | Not Available | Negative | 2845625 - 2846497 | 31759.9 |
| tryptophan synthase, alpha chain | SAMN06295900_105385 | Not Available | Negative | 2846623 - 2847423 | 28050.7 |
| site-specific dna-methyltransferase (adenine-specific) | SAMN06295900_105386 | Not Available | Negative | 2847460 - 2848332 | 32042.0 |
| tryptophan synthase, beta chain | SAMN06295900_105387 | Not Available | Negative | 2848344 - 2849537 | 43308.7 |
| phosphoribosylanthranilate isomerase | SAMN06295900_105388 | Not Available | Negative | 2849599 - 2850327 | 25666.3 |
| trna pseudouridine38-40 synthase | SAMN06295900_105389 | Not Available | Negative | 2850334 - 2851131 | 29568.4 |
| fimv c-terminal domain-containing protein | SAMN06295900_105390 | Not Available | Negative | 2851149 - 2852921 | 59910.6 |
| hypothetical protein | SAMN06295900_105391 | Not Available | Negative | 2852980 - 2853966 | 35129.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.