Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | SAMN06295900_105372 | Not Available | Positive | 2826674 - 2828917 | 82667.9 |
| glycogen operon protein | SAMN06295900_105373 | Not Available | Positive | 2828972 - 2831149 | 81504.4 |
| maltooligosyl trehalose hydrolase | SAMN06295900_105374 | Not Available | Positive | 2831142 - 2833079 | 71939.5 |
| 4-alpha-glucanotransferase | SAMN06295900_105375 | Not Available | Positive | 2833076 - 2835310 | 80558.8 |
| maltooligosyl trehalose synthase | SAMN06295900_105376 | Not Available | Positive | 2835307 - 2838198 | 106006.0 |
| histidine kinase | SAMN06295900_105377 | Not Available | Negative | 2838240 - 2839016 | 27703.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN06295900_105378 | Not Available | Positive | 2839176 - 2839517 | 11934.2 |
| o-succinylhomoserine sulfhydrylase | SAMN06295900_105379 | Not Available | Negative | 2839629 - 2840828 | 43126.3 |
| amidophosphoribosyltransferase | SAMN06295900_105380 | Not Available | Negative | 2841076 - 2842623 | 56490.6 |
| membrane protein required for colicin v production | SAMN06295900_105381 | Not Available | Negative | 2842720 - 2843214 | 17534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.