Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tautomerase enzyme | SAMN06295900_105362 | Not Available | Negative | 2811521 - 2811922 | 15339.4 |
| transcriptional regulator, lysr family | SAMN06295900_105363 | Not Available | Positive | 2812024 - 2812887 | 30891.5 |
| protein of unknown function | SAMN06295900_105364 | Not Available | Positive | 2813035 - 2813475 | 15732.9 |
| res domain-containing protein | SAMN06295900_105365 | Not Available | Positive | 2813472 - 2814173 | 25806.5 |
| serine/threonine protein phosphatase 1 | SAMN06295900_105366 | Not Available | Negative | 2814285 - 2815028 | 27413.7 |
| cytochrome c, mono-and diheme variants | SAMN06295900_105367 | Not Available | Negative | 2815084 - 2816784 | 59342.8 |
| choline dehydrogenase | SAMN06295900_105368 | Not Available | Negative | 2816815 - 2818416 | 57991.1 |
| membrane bound fad containing d-sorbitol dehydrogenase | SAMN06295900_105369 | Not Available | Negative | 2818545 - 2819108 | 19870.9 |
| starch synthase (maltosyl-transferring) | SAMN06295900_105370 | Not Available | Positive | 2819750 - 2823220 | 129243.0 |
| trehalose synthase | SAMN06295900_105371 | Not Available | Positive | 2823210 - 2826662 | 129517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.