Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | SAMN06295900_105352 | Not Available | Positive | 2802119 - 2803123 | 37323.5 |
| hypothetical protein | SAMN06295900_105353 | Not Available | Positive | 2803111 - 2803926 | 29093.2 |
| protein of unknown function | SAMN06295900_105354 | Not Available | Negative | 2803938 - 2804114 | 6806.03 |
| esterase, phb depolymerase family | SAMN06295900_105355 | Not Available | Negative | 2804245 - 2805381 | 41394.4 |
| pap2 superfamily protein | SAMN06295900_105356 | Not Available | Positive | 2805616 - 2806311 | 24448.6 |
| molybdate transport system substrate-binding protein | SAMN06295900_105357 | Not Available | Positive | 2806372 - 2807211 | 29358.2 |
| molybdate transport system permease protein | SAMN06295900_105358 | Not Available | Positive | 2807255 - 2807932 | 23740.7 |
| molybdate transport system atp-binding protein | SAMN06295900_105359 | Not Available | Positive | 2807934 - 2808638 | 25731.1 |
| transcriptional regulator, mode family | SAMN06295900_105360 | Not Available | Negative | 2808743 - 2809648 | 30610.6 |
| chad domain-containing protein | SAMN06295900_105361 | Not Available | Negative | 2809733 - 2811235 | 54107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.