Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii small subunit | SAMN06295900_105342 | Not Available | Negative | 2790149 - 2790469 | 10900.7 |
| choline monooxygenase | SAMN06295900_105343 | Not Available | Positive | 2790829 - 2791935 | 42491.4 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN06295900_105344 | Not Available | Positive | 2792055 - 2792924 | 30806.2 |
| carboxymethylenebutenolidase | SAMN06295900_105345 | Not Available | Negative | 2793056 - 2793928 | 31280.9 |
| hypothetical protein | SAMN06295900_105346 | Not Available | Negative | 2794128 - 2794685 | 20120.1 |
| nadh dehydrogenase | SAMN06295900_105347 | Not Available | Negative | 2794835 - 2796184 | 48861.2 |
| dna polymerase i | SAMN06295900_105348 | Not Available | Negative | 2796285 - 2799065 | 102547.0 |
| hypothetical protein | SAMN06295900_105349 | Not Available | Positive | 2799085 - 2799816 | 26959.5 |
| amp nucleosidase | SAMN06295900_105350 | Not Available | Negative | 2799895 - 2801424 | 57440.3 |
| hypothetical protein | SAMN06295900_105351 | Not Available | Positive | 2801588 - 2802001 | 14581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.