Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogenase-stabilizing/protective protein | SAMN06295900_105322 | Not Available | Positive | 2769459 - 2769797 | 12887.4 |
| electron transfer flavoprotein beta subunit | SAMN06295900_105323 | Not Available | Positive | 2769811 - 2770659 | 30718.4 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN06295900_105324 | Not Available | Positive | 2770656 - 2771765 | 39451.6 |
| electron transfer flavoprotein-quinone oxidoreductase | SAMN06295900_105325 | Not Available | Positive | 2771777 - 2773087 | 48284.0 |
| ferredoxin like protein | SAMN06295900_105326 | Not Available | Positive | 2773084 - 2773389 | 11177.4 |
| (2fe-2s) ferredoxin | SAMN06295900_105327 | Not Available | Positive | 2773432 - 2773758 | 11658.8 |
| hypothetical protein | SAMN06295900_105328 | Not Available | Positive | 2773755 - 2774243 | 17382.0 |
| rna polymerase primary sigma factor | SAMN06295900_105329 | Not Available | Positive | 2774371 - 2776158 | 66588.7 |
| hypothetical protein | SAMN06295900_105330 | Not Available | Negative | 2776906 - 2777196 | 11084.9 |
| protein of unknown function | SAMN06295900_105331 | Not Available | Negative | 2777193 - 2777672 | 17851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.