Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_105302 | Not Available | Negative | 2753911 - 2754189 | 9819.69 |
| nitrogen fixation protein nift | SAMN06295900_105303 | Not Available | Negative | 2754191 - 2754409 | 7898.68 |
| cysteine desulfurase | SAMN06295900_105304 | Not Available | Negative | 2754435 - 2755589 | 39423.3 |
| protein of unknown function | SAMN06295900_105305 | Not Available | Negative | 2755615 - 2755974 | 13424.0 |
| nitrogen fixation protein nifz | SAMN06295900_105306 | Not Available | Negative | 2755971 - 2756258 | 10371.1 |
| nitrogen fixation protein nifz | SAMN06295900_105307 | Not Available | Negative | 2756255 - 2756617 | 13302.7 |
| leucine rich repeat variant | SAMN06295900_105308 | Not Available | Negative | 2756610 - 2757434 | 30865.1 |
| hypothetical protein | SAMN06295900_105309 | Not Available | Negative | 2757431 - 2757715 | 10597.6 |
| iron-sulfur cluster assembly accessory protein | SAMN06295900_105310 | Not Available | Negative | 2758030 - 2758434 | 13886.6 |
| 4fe-4s binding domain-containing protein | SAMN06295900_105311 | Not Available | Negative | 2758506 - 2758700 | 6589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.