Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat-containing protein | SAMN06295900_105292 | Not Available | Positive | 2745635 - 2746288 | 22589.9 |
| sagb-type dehydrogenase domain-containing protein | SAMN06295900_105293 | Not Available | Positive | 2746285 - 2747964 | 61065.4 |
| rhodanese-like domain-containing protein | SAMN06295900_105294 | Not Available | Positive | 2747961 - 2748731 | 27591.8 |
| nitrogenase-associated protein | SAMN06295900_105295 | Not Available | Positive | 2748742 - 2749173 | 15290.6 |
| putative regulatory protein, fmdb family | SAMN06295900_105296 | Not Available | Positive | 2749189 - 2749425 | 8363.01 |
| hypothetical protein | SAMN06295900_105297 | Not Available | Negative | 2749478 - 2749852 | 13772.7 |
| monoamine oxidase | SAMN06295900_105298 | Not Available | Negative | 2749849 - 2751468 | 57475.3 |
| ferredoxin, 2fe-2s | SAMN06295900_105299 | Not Available | Negative | 2751482 - 2751778 | 10306.5 |
| sir2-like domain-containing protein | SAMN06295900_105300 | Not Available | Negative | 2751900 - 2752745 | 30624.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN06295900_105301 | Not Available | Negative | 2752758 - 2753921 | 41951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.