Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogenase molybdenum-cofactor synthesis protein nife | SAMN06295900_105282 | Not Available | Negative | 2737068 - 2738561 | 54410.3 |
| hypothetical protein | SAMN06295900_105283 | Not Available | Negative | 2738729 - 2739004 | 9593.52 |
| hypothetical protein | SAMN06295900_105284 | Not Available | Negative | 2739024 - 2739503 | 17539.6 |
| hypothetical protein | SAMN06295900_105285 | Not Available | Negative | 2739707 - 2740027 | 11340.6 |
| mo-nitrogenase mofe protein subunit nifk | SAMN06295900_105286 | Not Available | Negative | 2740041 - 2741600 | 58240.9 |
| mo-nitrogenase mofe protein subunit nifd precursor | SAMN06295900_105287 | Not Available | Negative | 2741698 - 2743161 | 54708.6 |
| mo-nitrogenase iron protein subunit nifh | SAMN06295900_105288 | Not Available | Negative | 2743244 - 2744125 | 31547.9 |
| hypothetical protein | SAMN06295900_105289 | Not Available | Negative | 2744183 - 2744458 | 9356.57 |
| hemoglobin | SAMN06295900_105290 | Not Available | Positive | 2744526 - 2744945 | 15452.7 |
| hypothetical protein | SAMN06295900_105291 | Not Available | Positive | 2744994 - 2745602 | 22579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.