Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate transport system substrate-binding protein | SAMN06295900_105272 | Not Available | Negative | 2730158 - 2730910 | 26443.2 |
| molybdate transport system permease protein | SAMN06295900_105273 | Not Available | Negative | 2730928 - 2731611 | 24318.3 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN06295900_105274 | Not Available | Negative | 2731756 - 2732760 | 36458.5 |
| hypothetical protein | SAMN06295900_105275 | Not Available | Negative | 2732757 - 2733374 | 23110.6 |
| nitrogen fixation protein nifq | SAMN06295900_105276 | Not Available | Negative | 2733495 - 2734094 | 22074.4 |
| ferredoxin iii, nif-specific | SAMN06295900_105277 | Not Available | Negative | 2734106 - 2734411 | 11004.1 |
| hypothetical protein | SAMN06295900_105278 | Not Available | Negative | 2734475 - 2734663 | 6997.38 |
| probable nitrogen fixation protein | SAMN06295900_105279 | Not Available | Negative | 2734725 - 2735234 | 18740.8 |
| nitrogen fixation protein nifx | SAMN06295900_105280 | Not Available | Negative | 2735227 - 2735640 | 15011.8 |
| nitrogenase molybdenum-iron protein nifn | SAMN06295900_105281 | Not Available | Negative | 2735637 - 2737049 | 50662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.