Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SAMN06295900_105262 | Not Available | Positive | 2719386 - 2720573 | 42900.3 |
| transcriptional regulator, arac family | SAMN06295900_105263 | Not Available | Positive | 2720705 - 2722135 | 53583.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN06295900_105264 | Not Available | Positive | 2722175 - 2722858 | 25285.3 |
| pyrroloquinoline-quinone synthase | SAMN06295900_105265 | Not Available | Negative | 2722846 - 2723565 | 27699.5 |
| hypothetical protein | SAMN06295900_105266 | Not Available | Negative | 2723691 - 2724308 | 22752.8 |
| anthranilate/para-aminobenzoate synthases component i | SAMN06295900_105267 | Not Available | Negative | 2724268 - 2725599 | 48796.2 |
| hypothetical protein | SAMN06295900_105268 | Not Available | Negative | 2725640 - 2726254 | 21857.1 |
| hypothetical protein | SAMN06295900_105269 | Not Available | Negative | 2726265 - 2727176 | 33559.7 |
| molybdate transport system regulatory protein | SAMN06295900_105270 | Not Available | Negative | 2728541 - 2729356 | 28532.1 |
| molybdate transport system atp-binding protein | SAMN06295900_105271 | Not Available | Negative | 2729369 - 2730136 | 28670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.