Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN06295900_105252 | Not Available | Negative | 2706111 - 2707961 | 64663.4 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN06295900_105253 | Not Available | Negative | 2707954 - 2708787 | 29145.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_105254 | Not Available | Negative | 2708851 - 2710023 | 40952.3 |
| predicted amidohydrolase | SAMN06295900_105255 | Not Available | Negative | 2710105 - 2710995 | 31940.0 |
| flavin containing amine oxidoreductase | SAMN06295900_105256 | Not Available | Negative | 2711278 - 2713728 | 89337.2 |
| hypothetical protein | SAMN06295900_105257 | Not Available | Negative | 2713910 - 2715466 | 55692.1 |
| protein of unknown function | SAMN06295900_105258 | Not Available | Negative | 2715695 - 2717071 | 49284.8 |
| adenylylsulfate kinase | SAMN06295900_105259 | Not Available | Negative | 2717122 - 2717724 | 21548.1 |
| transglycosylase slt domain-containing protein | SAMN06295900_105260 | Not Available | Negative | 2717721 - 2718209 | 17844.5 |
| hypothetical protein | SAMN06295900_105261 | Not Available | Positive | 2718548 - 2719369 | 30000.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.