Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_105232 | Not Available | Positive | 2683266 - 2683721 | 17189.5 |
| type ii/iii secretion system short domain-containing protein | SAMN06295900_105233 | Not Available | Negative | 2683792 - 2685390 | 55420.7 |
| two-component system, ompr family, phosphate regulon response regulator phob | SAMN06295900_105234 | Not Available | Negative | 2685414 - 2686163 | 28694.4 |
| signal transduction histidine kinase | SAMN06295900_105235 | Not Available | Negative | 2686185 - 2687375 | 42932.6 |
| type iii secretion protein c | SAMN06295900_105236 | Not Available | Negative | 2687535 - 2689307 | 62834.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN06295900_105237 | Not Available | Negative | 2689469 - 2691154 | 58214.1 |
| pilm protein | SAMN06295900_105238 | Not Available | Negative | 2691120 - 2691596 | 15684.8 |
| twitching motility protein pilt | SAMN06295900_105239 | Not Available | Negative | 2691597 - 2692565 | 34434.8 |
| pils n terminal | SAMN06295900_105240 | Not Available | Negative | 2692584 - 2693183 | 20332.1 |
| type ii secretory pathway, component pulf | SAMN06295900_105241 | Not Available | Negative | 2693229 - 2694305 | 39893.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.