Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein v | SAMN06295900_105222 | Not Available | Positive | 2675438 - 2677492 | 73654.2 |
| type iii secretion control protein hpap | SAMN06295900_105223 | Not Available | Positive | 2677528 - 2678259 | 26864.5 |
| type iii secretion system apparatus protein yscq/hrcq | SAMN06295900_105224 | Not Available | Positive | 2678332 - 2679462 | 40368.4 |
| type iii secretion protein r | SAMN06295900_105225 | Not Available | Positive | 2679449 - 2680099 | 23864.1 |
| type iii secretion protein s | SAMN06295900_105226 | Not Available | Positive | 2680107 - 2680370 | 9112.39 |
| hypothetical protein | SAMN06295900_105227 | Not Available | Negative | 2680244 - 2680813 | 20374.4 |
| hypothetical protein | SAMN06295900_105228 | Not Available | Positive | 2680817 - 2681356 | 19342.9 |
| type iii secretion protein d | SAMN06295900_105229 | Not Available | Positive | 2681517 - 2682551 | 36389.1 |
| hypothetical protein | SAMN06295900_105230 | Not Available | Positive | 2682619 - 2682882 | 9416.28 |
| hypothetical protein | SAMN06295900_105231 | Not Available | Positive | 2683015 - 2683179 | 5656.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.