Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase | SAMN06295900_105212 | Not Available | Negative | 2666834 - 2667799 | 35357.1 |
| type iii secretion protein t | SAMN06295900_105213 | Not Available | Negative | 2667857 - 2668666 | 28906.5 |
| type iii secretion protein (hrpb7) | SAMN06295900_105214 | Not Available | Negative | 2668663 - 2669193 | 20250.0 |
| atp synthase in type iii secretion protein n | SAMN06295900_105215 | Not Available | Negative | 2669237 - 2670598 | 49233.5 |
| type iii secretion protein l | SAMN06295900_105216 | Not Available | Negative | 2670595 - 2671452 | 30561.9 |
| type iii secretion protein (hrpb4) | SAMN06295900_105217 | Not Available | Negative | 2671449 - 2672138 | 26230.2 |
| type iii secretion apparatus lipoprotein, yscj/hrcj family | SAMN06295900_105218 | Not Available | Negative | 2672178 - 2673020 | 29674.7 |
| type iii secretion inner rod protein hrpb2 | SAMN06295900_105219 | Not Available | Negative | 2673023 - 2673430 | 14300.1 |
| type iii secretion protein hrpb1 | SAMN06295900_105220 | Not Available | Negative | 2673463 - 2674062 | 22166.4 |
| type iii secretion protein u | SAMN06295900_105221 | Not Available | Positive | 2674345 - 2675418 | 39061.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.