Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, narl family, capsular synthesis sensor histidine kinase rcsc | SAMN06295900_105202 | Not Available | Positive | 2650437 - 2653781 | 120464.0 |
| hypothetical protein | SAMN06295900_105203 | Not Available | Negative | 2653756 - 2653947 | 6951.56 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN06295900_105204 | Not Available | Negative | 2653981 - 2655186 | 42785.0 |
| glycine/d-amino acid oxidase | SAMN06295900_105205 | Not Available | Negative | 2655472 - 2656644 | 42731.5 |
| aldehyde dehydrogenase (nad+) | SAMN06295900_105206 | Not Available | Negative | 2656785 - 2658284 | 52722.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_105207 | Not Available | Negative | 2658562 - 2659668 | 38314.7 |
| hypothetical protein | SAMN06295900_105208 | Not Available | Negative | 2659967 - 2662903 | 107112.0 |
| protein of unknown function | SAMN06295900_105209 | Not Available | Negative | 2662905 - 2663933 | 38320.4 |
| transcriptional regulator, lysr family | SAMN06295900_105210 | Not Available | Positive | 2664091 - 2665032 | 34948.8 |
| cysteine desulfurase | SAMN06295900_105211 | Not Available | Positive | 2665099 - 2666613 | 53034.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.