Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase with gaf sensor | SAMN06295900_105192 | Not Available | Positive | 2638774 - 2639772 | 36351.5 |
| mfs transporter, mhs family, proline/betaine transporter | SAMN06295900_105193 | Not Available | Negative | 2639773 - 2641104 | 47668.5 |
| hippurate hydrolase | SAMN06295900_105194 | Not Available | Negative | 2641122 - 2642309 | 42758.0 |
| dna-binding transcriptional regulator, lysr family | SAMN06295900_105195 | Not Available | Positive | 2642431 - 2643339 | 32749.9 |
| hypothetical protein | SAMN06295900_105196 | Not Available | Positive | 2643493 - 2643756 | 10120.1 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN06295900_105197 | Not Available | Negative | 2643808 - 2644761 | 33620.6 |
| methyl-accepting chemotaxis protein | SAMN06295900_105198 | Not Available | Negative | 2644758 - 2646308 | 54329.4 |
| iron complex outermembrane recepter protein | SAMN06295900_105199 | Not Available | Positive | 2646574 - 2648748 | 78672.0 |
| hypothetical protein | SAMN06295900_105200 | Not Available | Positive | 2648799 - 2649479 | 24949.6 |
| two component transcriptional regulator, luxr family | SAMN06295900_105201 | Not Available | Negative | 2649474 - 2650163 | 24471.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.