Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_105182 | Not Available | Positive | 2626980 - 2627954 | 33362.6 |
| gluconate 2-dehydrogenase subunit 3 | SAMN06295900_105183 | Not Available | Positive | 2627951 - 2628649 | 25886.4 |
| choline dehydrogenase | SAMN06295900_105184 | Not Available | Positive | 2628639 - 2630282 | 60462.5 |
| protein of unknown function | SAMN06295900_105185 | Not Available | Positive | 2630408 - 2630977 | 19880.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06295900_105186 | Not Available | Positive | 2630964 - 2631965 | 35559.5 |
| pyruvate dehydrogenase (quinone) | SAMN06295900_105187 | Not Available | Negative | 2632039 - 2633832 | 64955.3 |
| transcriptional regulator, lysr family | SAMN06295900_105188 | Not Available | Negative | 2633908 - 2634852 | 34564.6 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_105189 | Not Available | Positive | 2634991 - 2636232 | 42534.9 |
| hypothetical protein | SAMN06295900_105190 | Not Available | Negative | 2636298 - 2636723 | 15808.3 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN06295900_105191 | Not Available | Negative | 2636877 - 2638436 | 55891.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.