Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_105172 | Not Available | Positive | 2618631 - 2618837 | 7243.39 |
| sporulation protein ylmc, prc-barrel domain family | SAMN06295900_105173 | Not Available | Positive | 2618897 - 2619424 | 18741.0 |
| hypothetical protein | SAMN06295900_105174 | Not Available | Negative | 2619566 - 2619883 | 10124.9 |
| cytochrome c, mono-and diheme variants | SAMN06295900_105175 | Not Available | Negative | 2619944 - 2621353 | 49563.8 |
| hypothetical protein | SAMN06295900_105176 | Not Available | Negative | 2621344 - 2621757 | 14105.0 |
| cytochrome c oxidase subunit 3 | SAMN06295900_105177 | Not Available | Negative | 2621800 - 2622420 | 22871.2 |
| cytochrome c oxidase subunit 1/cytochrome c oxidase subunit i+iii | SAMN06295900_105178 | Not Available | Negative | 2622421 - 2624424 | 73491.7 |
| cytochrome c oxidase subunit 2 | SAMN06295900_105179 | Not Available | Negative | 2624439 - 2625386 | 33610.2 |
| hypothetical protein | SAMN06295900_105180 | Not Available | Negative | 2625425 - 2625664 | 8157.98 |
| l-alanine-dl-glutamate epimerase | SAMN06295900_105181 | Not Available | Positive | 2625758 - 2626948 | 42079.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.