Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide heptosyltransferase ii | SAMN06295900_105152 | Not Available | Positive | 2591099 - 2592310 | 43738.8 |
| beta-1,4-n-acetylglucosamine oligosaccharide 6-o-carbamoyltransferase nodu | SAMN06295900_105153 | Not Available | Positive | 2592343 - 2594103 | 65188.4 |
| glycosyltransferase, gt2 family | SAMN06295900_105154 | Not Available | Positive | 2594100 - 2595197 | 39656.5 |
| adp-heptose:lps heptosyltransferase | SAMN06295900_105155 | Not Available | Positive | 2595185 - 2596333 | 41451.0 |
| glycosyl transferases group 1 | SAMN06295900_105156 | Not Available | Positive | 2596323 - 2597276 | 35770.6 |
| udp-glucuronate decarboxylase | SAMN06295900_105157 | Not Available | Positive | 2597382 - 2598416 | 38392.5 |
| threonine dehydrogenase | SAMN06295900_105158 | Not Available | Negative | 2598400 - 2599614 | 42553.8 |
| protein of unknown function | SAMN06295900_105159 | Not Available | Positive | 2599965 - 2606348 | 225671.0 |
| atp-binding cassette, subfamily b | SAMN06295900_105160 | Not Available | Negative | 2606507 - 2609212 | 97841.6 |
| protein of unknown function | SAMN06295900_105161 | Not Available | Negative | 2609209 - 2609598 | 13893.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.