Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295900_105132 | Not Available | Positive | 2565781 - 2566839 | 39072.4 |
| hypothetical protein | SAMN06295900_105133 | Not Available | Positive | 2566850 - 2568604 | 63068.5 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN06295900_105134 | Not Available | Negative | 2568699 - 2569622 | 33581.1 |
| predicted outer membrane protein | SAMN06295900_105135 | Not Available | Positive | 2569654 - 2570193 | 19488.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN06295900_105136 | Not Available | Negative | 2570260 - 2571561 | 47285.2 |
| uncharacterized protein, yigz family | SAMN06295900_105137 | Not Available | Positive | 2572110 - 2572703 | 21281.5 |
| hypothetical protein | SAMN06295900_105138 | Not Available | Positive | 2572852 - 2573178 | 12305.5 |
| dimethylhistidine n-methyltransferase | SAMN06295900_105139 | Not Available | Negative | 2573287 - 2574327 | 38379.3 |
| ergothioneine biosynthesis protein egtb | SAMN06295900_105140 | Not Available | Negative | 2574311 - 2575552 | 46559.8 |
| uncharacterized conserved protein yece, duf72 family | SAMN06295900_105141 | Not Available | Negative | 2575636 - 2576625 | 37072.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.