Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor cytidylyltransferase | SAMN06295900_105122 | Not Available | Positive | 2554372 - 2554962 | 20127.1 |
| hypothetical protein | SAMN06295900_105123 | Not Available | Positive | 2555135 - 2555275 | 4978.63 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN06295900_105124 | Not Available | Positive | 2555450 - 2557000 | 55286.9 |
| peptidoglycan synthetase ftsi | SAMN06295900_105125 | Not Available | Positive | 2557304 - 2559031 | 61374.5 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN06295900_105126 | Not Available | Positive | 2559211 - 2560299 | 39050.0 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN06295900_105127 | Not Available | Positive | 2560292 - 2561275 | 34997.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN06295900_105128 | Not Available | Positive | 2561272 - 2562417 | 39848.3 |
| hypothetical protein | SAMN06295900_105129 | Not Available | Positive | 2563171 - 2563773 | 22464.4 |
| deoxyribodipyrimidine photo-lyase type i | SAMN06295900_105130 | Not Available | Negative | 2563805 - 2565334 | 57467.6 |
| protein of unknown function | SAMN06295900_105131 | Not Available | Positive | 2565471 - 2565626 | 5388.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.