Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_105112 | Not Available | Positive | 2545090 - 2545398 | 11190.0 |
| hypothetical protein | SAMN06295900_105113 | Not Available | Positive | 2545460 - 2545699 | 9208.0 |
| hypothetical protein | SAMN06295900_105114 | Not Available | Negative | 2545744 - 2545968 | 8355.58 |
| cold-shock dna-binding protein family | SAMN06295900_105115 | Not Available | Negative | 2546215 - 2546418 | 7309.58 |
| ssu ribosomal protein s21p | SAMN06295900_105116 | Not Available | Positive | 2547024 - 2547236 | 8178.28 |
| aspartate carbamoyltransferase | SAMN06295900_105117 | Not Available | Positive | 2547495 - 2548790 | 48012.3 |
| alcohol dehydrogenase | SAMN06295900_105118 | Not Available | Negative | 2548850 - 2549941 | 38050.9 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN06295900_105119 | Not Available | Positive | 2550415 - 2550990 | 20191.3 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN06295900_105120 | Not Available | Positive | 2551040 - 2552086 | 35922.4 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN06295900_105121 | Not Available | Positive | 2552083 - 2554305 | 78496.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.