Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high potential iron-sulfur protein | SAMN06295900_10582 | Not Available | Positive | 2506578 - 2506889 | 11163.1 |
| tfp pilus assembly protein pilf | SAMN06295900_10583 | Not Available | Positive | 2507052 - 2508785 | 63528.6 |
| dihydrodipicolinate synthetase family protein | SAMN06295900_10584 | Not Available | Negative | 2508883 - 2509233 | 12597.5 |
| hypothetical protein | SAMN06295900_10585 | Not Available | Positive | 2509522 - 2510688 | 42850.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN06295900_10586 | Not Available | Negative | 2511162 - 2512022 | 29800.0 |
| hypothetical protein | SAMN06295900_10587 | Not Available | Positive | 2512603 - 2512860 | 9660.27 |
| Trna-leu | Not Available | Not Available | Positive | 2513042 - 2513126 | Not Available |
| 6-phosphogluconolactonase | SAMN06295900_10589 | Not Available | Negative | 2513209 - 2514495 | 45801.0 |
| arac family transcriptional regulator, transcriptional activator of poba | SAMN06295900_10590 | Not Available | Negative | 2514506 - 2515450 | 35265.6 |
| outer membrane protein (porin) | SAMN06295900_10591 | Not Available | Negative | 2515582 - 2516607 | 36228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.