Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_10572 | Not Available | Negative | 2494808 - 2495620 | 28168.4 |
| acetolactate synthase-1/2/3 large subunit | SAMN06295900_10573 | Not Available | Negative | 2495675 - 2497249 | 54898.1 |
| homodimeric dihydroxyacetone kinase | SAMN06295900_10574 | Not Available | Negative | 2497728 - 2499440 | 58888.1 |
| hypothetical protein | SAMN06295900_10575 | Not Available | Positive | 2499483 - 2499749 | 9769.84 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06295900_10576 | Not Available | Negative | 2499762 - 2500394 | 21865.2 |
| sugar phosphate permease | SAMN06295900_10577 | Not Available | Negative | 2500613 - 2501941 | 47750.6 |
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN06295900_10578 | Not Available | Positive | 2502302 - 2503849 | 54918.3 |
| transcriptional regulator, arsr family | SAMN06295900_10579 | Not Available | Positive | 2504029 - 2504331 | 10840.0 |
| 2,4-dienoyl-coa reductase | SAMN06295900_10580 | Not Available | Positive | 2504396 - 2505454 | 37327.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_10581 | Not Available | Positive | 2505710 - 2506471 | 26500.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.