Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, winged helix family | SAMN06295900_10562 | Not Available | Positive | 2485372 - 2486061 | 25184.6 |
| two-component system, ompr family, sensor histidine kinase ades | SAMN06295900_10563 | Not Available | Positive | 2486061 - 2487131 | 38262.3 |
| transcriptional regulator, iclr family | SAMN06295900_10564 | Not Available | Positive | 2487363 - 2488088 | 26351.9 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN06295900_10565 | Not Available | Negative | 2488089 - 2489570 | 53166.5 |
| nipsnap protein | SAMN06295900_10566 | Not Available | Negative | 2489658 - 2489984 | 12546.3 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN06295900_10567 | Not Available | Negative | 2489974 - 2491656 | 62011.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_10568 | Not Available | Negative | 2491653 - 2492537 | 32527.3 |
| amino acid synthesis | SAMN06295900_10569 | Not Available | Negative | 2492562 - 2493167 | 21714.8 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06295900_10570 | Not Available | Negative | 2493221 - 2493736 | 19507.3 |
| hypothetical protein | SAMN06295900_10571 | Not Available | Negative | 2493752 - 2494789 | 37413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.