Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_10532 | Not Available | Positive | 2444558 - 2444833 | 10375.5 |
| cdp-diacylglycerol pyrophosphatase | SAMN06295900_10533 | Not Available | Positive | 2444835 - 2445623 | 28653.0 |
| 3-methylcrotonoyl-coa carboxylase, alpha subunit | SAMN06295900_10534 | Not Available | Negative | 2445832 - 2447841 | 71764.7 |
| methylglutaconyl-coa hydratase | SAMN06295900_10535 | Not Available | Negative | 2447909 - 2448694 | 27534.1 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN06295900_10536 | Not Available | Negative | 2448733 - 2450340 | 57491.0 |
| isovaleryl-coa dehydrogenase | SAMN06295900_10537 | Not Available | Negative | 2450388 - 2451569 | 42849.8 |
| transcriptional regulator, tetr family | SAMN06295900_10538 | Not Available | Positive | 2451794 - 2452573 | 28899.9 |
| endoglucanase | SAMN06295900_10539 | Not Available | Positive | 2452779 - 2454170 | 50293.3 |
| hypothetical protein | SAMN06295900_10540 | Not Available | Positive | 2454320 - 2455543 | 42736.1 |
| protein of unknown function | SAMN06295900_10541 | Not Available | Positive | 2455540 - 2456706 | 42973.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.