Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, putative metabolite:h+ symporter | SAMN06295900_10512 | Not Available | Positive | 2422334 - 2423773 | 51018.0 |
| protein of unknown function | SAMN06295900_10513 | Not Available | Positive | 2424053 - 2424463 | 14678.8 |
| lema protein | SAMN06295900_10514 | Not Available | Positive | 2424580 - 2425236 | 23592.9 |
| uncharacterized protein | SAMN06295900_10515 | Not Available | Positive | 2425233 - 2426105 | 29882.2 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN06295900_10516 | Not Available | Positive | 2426108 - 2426605 | 18684.4 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN06295900_10517 | Not Available | Negative | 2426684 - 2427736 | 38411.2 |
| transcriptional regulator, arac family | SAMN06295900_10518 | Not Available | Positive | 2427932 - 2428900 | 35372.8 |
| predicted oxidoreductase | SAMN06295900_10519 | Not Available | Negative | 2428964 - 2429953 | 36033.0 |
| hypothetical protein | SAMN06295900_10520 | Not Available | Negative | 2430135 - 2430494 | 12806.9 |
| sarcosine oxidase subunit gamma | SAMN06295900_10521 | Not Available | Negative | 2430825 - 2431451 | 22491.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.