Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhh-type transcriptional regulator, rel operon repressor / antitoxin relb | SAMN06295900_104434 | Not Available | Positive | 2402490 - 2402717 | 8699.47 |
| mrna interferase rele/stbe | SAMN06295900_104435 | Not Available | Positive | 2402701 - 2402970 | 10522.8 |
| hypothetical protein | SAMN06295900_104436 | Not Available | Negative | 2403039 - 2403902 | 31087.3 |
| hypothetical protein | SAMN06295900_104437 | Not Available | Positive | 2404203 - 2404556 | 13474.1 |
| hypothetical protein | SAMN06295900_104438 | Not Available | Positive | 2405089 - 2405184 | 3393.71 |
| hypothetical protein | SAMN06295900_104439 | Not Available | Negative | 2405224 - 2405634 | 15067.3 |
| ribbon-helix-helix domain-containing protein | SAMN06295900_104440 | Not Available | Negative | 2405634 - 2405873 | 8687.26 |
| dna replication protein dnac | SAMN06295900_104441 | Not Available | Negative | 2406168 - 2406935 | 28729.8 |
| hypothetical protein | SAMN06295900_104442 | Not Available | Negative | 2406950 - 2407564 | 22917.5 |
| thioesterase domain-containing protein | SAMN06295900_1051 | Not Available | Positive | 2407565 - 2409103 | 55216.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.