Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | SAMN06295900_104384 | Not Available | Positive | 2336296 - 2336814 | 18744.3 |
| hypothetical protein | SAMN06295900_104385 | Not Available | Negative | 2336918 - 2337319 | 14228.7 |
| formaldehyde activating enzyme | SAMN06295900_104386 | Not Available | Negative | 2337441 - 2337950 | 17906.4 |
| triphosphoribosyl-dephospho-coa synthase | SAMN06295900_104387 | Not Available | Negative | 2338097 - 2339011 | 31254.2 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN06295900_104388 | Not Available | Negative | 2339004 - 2340083 | 37923.6 |
| methenyltetrahydromethanopterin cyclohydrolase | SAMN06295900_104389 | Not Available | Negative | 2340080 - 2341108 | 35837.9 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN06295900_104390 | Not Available | Negative | 2341083 - 2342294 | 42322.8 |
| methylene-tetrahydromethanopterin dehydrogenase | SAMN06295900_104391 | Not Available | Negative | 2342330 - 2343262 | 32313.9 |
| beta-rfap synthase | SAMN06295900_104392 | Not Available | Negative | 2343347 - 2344375 | 35573.4 |
| hypothetical protein | SAMN06295900_104393 | Not Available | Positive | 2344491 - 2344667 | 6062.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.