Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | SAMN06295900_104374 | Not Available | Positive | 2323205 - 2324689 | 54590.1 |
| ribulose 1,5-bisphosphate carboxylase small subunit | SAMN06295900_104375 | Not Available | Positive | 2324889 - 2325317 | 16299.2 |
| probable rubsico expression protein cbbx | SAMN06295900_104376 | Not Available | Positive | 2325376 - 2326434 | 38602.7 |
| d-fructose 1,6-bisphosphatase | SAMN06295900_104377 | Not Available | Positive | 2326455 - 2327540 | 39814.5 |
| phosphoribulokinase | SAMN06295900_104378 | Not Available | Positive | 2327591 - 2328463 | 32900.3 |
| transketolase | SAMN06295900_104379 | Not Available | Positive | 2328497 - 2330557 | 73056.8 |
| fructose-bisphosphate aldolase | SAMN06295900_104380 | Not Available | Positive | 2330606 - 2331643 | 36979.0 |
| dihydropteroate synthase-related protein | SAMN06295900_104381 | Not Available | Negative | 2331908 - 2333296 | 50465.5 |
| flavoprotein | SAMN06295900_104382 | Not Available | Negative | 2333275 - 2333871 | 21927.3 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN06295900_104383 | Not Available | Negative | 2333868 - 2335919 | 75193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.