Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mxal protein | SAMN06295900_104354 | Not Available | Positive | 2301542 - 2302525 | 35238.4 |
| dna-binding beta-propeller fold protein ynce | SAMN06295900_104355 | Not Available | Positive | 2302616 - 2303701 | 38434.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN06295900_104356 | Not Available | Negative | 2303790 - 2306192 | 85121.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06295900_104357 | Not Available | Positive | 2306449 - 2307480 | 37920.5 |
| two component transcriptional regulator, luxr family | SAMN06295900_104358 | Not Available | Negative | 2307450 - 2308112 | 23362.3 |
| pyrroloquinoline quinone biosynthesis protein e | SAMN06295900_104359 | Not Available | Negative | 2308109 - 2309341 | 45501.1 |
| pyrroloquinoline quinone biosynthesis protein d | SAMN06295900_104360 | Not Available | Negative | 2309346 - 2309618 | 10045.8 |
| pyrroloquinoline-quinone synthase | SAMN06295900_104361 | Not Available | Negative | 2309615 - 2310355 | 28364.6 |
| pyrroloquinoline quinone biosynthesis protein b | SAMN06295900_104362 | Not Available | Negative | 2310480 - 2311409 | 32945.8 |
| cytochrome b561 | SAMN06295900_104363 | Not Available | Negative | 2311406 - 2312020 | 22591.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.