Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose pyrophosphorylase | SAMN06295900_104334 | Not Available | Negative | 2276726 - 2277607 | 32500.4 |
| valyl-trna synthetase | SAMN06295900_104335 | Not Available | Negative | 2277663 - 2280527 | 106944.0 |
| atp-dependent dna helicase uvrd | SAMN06295900_104336 | Not Available | Positive | 2280698 - 2283067 | 87163.4 |
| adenosylhomocysteine nucleosidase | SAMN06295900_104337 | Not Available | Positive | 2283064 - 2283849 | 27680.1 |
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN06295900_104338 | Not Available | Negative | 2283994 - 2285244 | 43475.1 |
| methyl-accepting chemotaxis sensory transducer | SAMN06295900_104339 | Not Available | Positive | 2285673 - 2287343 | 58098.5 |
| rnd family efflux transporter, mfp subunit | SAMN06295900_104340 | Not Available | Negative | 2287436 - 2288317 | 31856.3 |
| protein of unknown function | SAMN06295900_104341 | Not Available | Negative | 2288352 - 2288552 | 7061.91 |
| uncharacterized membrane protein yccc | SAMN06295900_104342 | Not Available | Negative | 2288542 - 2290767 | 78946.6 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295900_104343 | Not Available | Negative | 2290789 - 2292300 | 53136.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.