Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN06295900_104324 | Not Available | Negative | 2267409 - 2268227 | 29419.8 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN06295900_104325 | Not Available | Negative | 2268245 - 2269420 | 41658.5 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN06295900_104326 | Not Available | Negative | 2269550 - 2270623 | 38458.0 |
| transcriptional regulator, rpir family | SAMN06295900_104327 | Not Available | Positive | 2270873 - 2271754 | 32406.4 |
| myo-inositol 2-dehydrogenase | SAMN06295900_104328 | Not Available | Positive | 2271747 - 2272769 | 36586.3 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN06295900_104329 | Not Available | Positive | 2272873 - 2273910 | 37176.1 |
| tusa-related sulfurtransferase | SAMN06295900_104330 | Not Available | Positive | 2274066 - 2274293 | 8388.24 |
| protein of unknown function | SAMN06295900_104331 | Not Available | Negative | 2274349 - 2274807 | 16522.7 |
| lysm domain-containing protein | SAMN06295900_104332 | Not Available | Negative | 2274795 - 2275532 | 26662.9 |
| hypothetical protein | SAMN06295900_104333 | Not Available | Positive | 2275985 - 2276644 | 23149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.