Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-binding chemotaxis protein chew | SAMN06295900_104314 | Not Available | Positive | 2255798 - 2256331 | 18978.2 |
| methyl-accepting chemotaxis protein | SAMN06295900_104315 | Not Available | Positive | 2256370 - 2258667 | 80436.9 |
| two-component system, chemotaxis family, response regulator cheb | SAMN06295900_104316 | Not Available | Positive | 2258724 - 2259818 | 38299.1 |
| hypothetical protein | SAMN06295900_104317 | Not Available | Positive | 2259991 - 2260269 | 9481.07 |
| hypothetical protein | SAMN06295900_104318 | Not Available | Positive | 2260266 - 2260682 | 14768.1 |
| phosphothreonine lyase | SAMN06295900_104319 | Not Available | Negative | 2260793 - 2261506 | 26098.3 |
| 5-deoxyglucuronate isomerase | SAMN06295900_104320 | Not Available | Negative | 2261666 - 2262469 | 29655.0 |
| 2-keto-myo-inositol dehydratase | SAMN06295900_104321 | Not Available | Negative | 2262469 - 2263392 | 33762.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN06295900_104322 | Not Available | Negative | 2263445 - 2265361 | 67599.7 |
| 5-dehydro-2-deoxygluconokinase | SAMN06295900_104323 | Not Available | Negative | 2265361 - 2267379 | 73436.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.