Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin z | SAMN06295900_104294 | Not Available | Positive | 2234868 - 2235596 | 24584.1 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN06295900_104295 | Not Available | Positive | 2235638 - 2236087 | 16878.1 |
| glutaminyl-trna synthetase | SAMN06295900_104296 | Not Available | Negative | 2236172 - 2237887 | 65325.8 |
| osmotically inducible lipoprotein osmb | SAMN06295900_104297 | Not Available | Positive | 2238164 - 2238370 | 6317.79 |
| predicted o-methyltransferase yrrm | SAMN06295900_104298 | Not Available | Negative | 2238410 - 2239078 | 23732.2 |
| hypothetical protein | SAMN06295900_104299 | Not Available | Positive | 2239199 - 2239762 | 20003.5 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN06295900_104300 | Not Available | Negative | 2239793 - 2241013 | 43653.2 |
| alanyl-trna synthetase | SAMN06295900_104301 | Not Available | Positive | 2241316 - 2243940 | 95144.2 |
| transcriptional regulator, lysr family | SAMN06295900_104302 | Not Available | Negative | 2244130 - 2245068 | 33589.4 |
| uncharacterised mfs-type transporter ybfb | SAMN06295900_104303 | Not Available | Positive | 2245236 - 2246504 | 42871.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.